Ryšavý, Petr and Železný, Filip

Ryšavý, P., & Železný, F. (2023). Reference-free phylogeny from sequencing data. BioData Mining, 16(1), 13.


Clustering of genetic sequences is one of the key parts of bioinformatics analyses. Resulting phylogenetic trees are beneficial for solving many research questions, including tracing the history of species, studying migration in the past, or tracing a source of a virus outbreak. At the same time, biologists provide more data in the raw form of reads or only on contig-level assembly. Therefore, tools that are able to process those data without supervision need to be developed.


  author = {Ryšavý, Petr and Železný, Filip},
  title = {Reference-free phylogeny from sequencing data},
  journal = {BioData Mining},
  year = {2023},
  month = mar,
  day = {27},
  volume = {16},
  number = {1},
  pages = {13},
  issn = {1756-0381},
  doi = {10.1186/s13040-023-00329-x},
  url = {https://doi.org/10.1186/s13040-023-00329-x}